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The Stokes equation describes the motion of fluids when inertial forces are negligible compared with viscous forces. In this article, we explore the consequence of parity-violating and non-dissipative (i.e. odd) viscosities on Stokes flows in three dimensions. Parity-violating viscosities are coefficients of the viscosity tensor that are not invariant under mirror reflections of space, while odd viscosities are those which do not contribute to dissipation of mechanical energy. These viscosities can occur in systems ranging from synthetic and biological active fluids to magnetized and rotating fluids. We first systematically enumerate all possible parity-violating viscosities compatible with cylindrical symmetry, highlighting their connection to potential microscopic realizations. Then, using a combination of analytical and numerical methods, we analyse the effects of parity-violating viscosities on the Stokeslet solution, on the flow past a sphere or a bubble and on many-particle sedimentation. In all the cases that we analyse, parity-violating viscosities give rise to an azimuthal flow even when the driving force is parallel to the axis of cylindrical symmetry. For a few sedimenting particles, the azimuthal flow bends the trajectories compared with a traditional Stokes flow. For a cloud of particles, the azimuthal flow impedes the transformation of the spherical cloud into a torus and the subsequent breakup into smaller parts that would otherwise occur. The presence of azimuthal flows in cylindrically symmetric systems (sphere, bubble, cloud of particles) can serve as a probe for parity-violating viscosities in experimental systems.